DevOps instructions
The IHCC data harmonization infrastructure comprises the following components:
- ZOOMA: Mapping service, used by the automated data dictionary mapping service
- Deploy location: https://mapping.ihccglobal.app/zooma/
- GitHub: https://github.com/IHCC-cohorts/zooma
- Dockerhub: https://hub.docker.com/r/ihcc/zooma-web
- OLS: term browser for data dictionary terms as well as GECKO and DUO.
- Deploy location: https://registry.ihccglobal.app/index
- GitHub: https://github.com/IHCC-cohorts/OLS
- Dockerhub: https://hub.docker.com/r/ihcc/ols-web
- OxO: Mapping browswer that shows how the data dictionaries are mapped to the various OBO ontologies under the GECKO umbrella
- Deploy location: https://mapping.ihccglobal.app/
- GitHub: https://github.com/IHCC-cohorts/OXO
- Dockerhub: https://hub.docker.com/r/ihcc/oxo-web
- DROID: The tool used by the IHCC Data Steward for mapping and building new data dictionaries
- Deploy location: https://droid.ontodev.com/IHCC (currently hosted by Knocean)
The tools suite and how it is deployed is documented in the (private) IHCC config repo.